Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.86□□□□□ -0.19
ApoeP08226 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.86□□□□□ -0.19
ApoeP08226 Gm10252-201ENSMUST00000209541 832 ntBASIC13.86□□□□□ -0.19
ApoeP08226 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.86□□□□□ -0.19
ApoeP08226 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.86□□□□□ -0.19
ApoeP08226 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
ApoeP08226 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ApoeP08226 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ApoeP08226 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ApoeP08226 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ApoeP08226 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ApoeP08226 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
ApoeP08226 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.85□□□□□ -0.19
ApoeP08226 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.85□□□□□ -0.19
ApoeP08226 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.85□□□□□ -0.19
ApoeP08226 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.85□□□□□ -0.19
ApoeP08226 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.85□□□□□ -0.19
ApoeP08226 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ApoeP08226 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ApoeP08226 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ApoeP08226 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ApoeP08226 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.85□□□□□ -0.19
ApoeP08226 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ApoeP08226 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ApoeP08226 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ApoeP08226 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.84□□□□□ -0.19
ApoeP08226 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ApoeP08226 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Rubie-203ENSMUST00000227803 2430 ntBASIC13.84□□□□□ -0.19
ApoeP08226 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ApoeP08226 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ApoeP08226 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
ApoeP08226 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ApoeP08226 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms