Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm18246-201ENSMUST00000221023 728 ntBASIC14.04□□□□□ -0.16
Hcn1O88704 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.04□□□□□ -0.16
Hcn1O88704 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hcn1O88704 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Hcn1O88704 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hcn1O88704 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hcn1O88704 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hcn1O88704 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hcn1O88704 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Hcn1O88704 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.03□□□□□ -0.16
Hcn1O88704 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.03□□□□□ -0.16
Hcn1O88704 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.03□□□□□ -0.16
Hcn1O88704 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.03□□□□□ -0.16
Hcn1O88704 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.03□□□□□ -0.16
Hcn1O88704 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.03□□□□□ -0.16
Hcn1O88704 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hcn1O88704 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.03□□□□□ -0.16
Hcn1O88704 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn1O88704 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Hcn1O88704 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hcn1O88704 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.02□□□□□ -0.16
Hcn1O88704 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Hcn1O88704 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn1O88704 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.02□□□□□ -0.17
Hcn1O88704 Gm11594-201ENSMUST00000122313 162 ntBASIC14.02□□□□□ -0.17
Hcn1O88704 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.02□□□□□ -0.17
Hcn1O88704 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.02□□□□□ -0.17
Hcn1O88704 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Mir8117-201ENSMUST00000184773 107 ntBASIC14.02□□□□□ -0.17
Hcn1O88704 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.02□□□□□ -0.17
Hcn1O88704 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.02□□□□□ -0.17
Hcn1O88704 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Hcn1O88704 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Hcn1O88704 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn1O88704 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.01□□□□□ -0.17
Hcn1O88704 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hcn1O88704 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hcn1O88704 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms