Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.03□□□□□ -0.32
Col5a1O88207 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col5a1O88207 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Col5a1O88207 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Col5a1O88207 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Col5a1O88207 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.02□□□□□ -0.32
Col5a1O88207 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Col5a1O88207 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.02□□□□□ -0.32
Col5a1O88207 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.02□□□□□ -0.32
Col5a1O88207 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Col5a1O88207 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.02□□□□□ -0.32
Col5a1O88207 Gm3786-201ENSMUST00000202659 378 ntBASIC13.02□□□□□ -0.32
Col5a1O88207 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col5a1O88207 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Efs-202ENSMUST00000227037 2540 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Col5a1O88207 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Carlr-201ENSMUST00000181515 2574 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.02□□□□□ -0.33
Col5a1O88207 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.02□□□□□ -0.33
Col5a1O88207 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Col5a1O88207 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Gm45784-201ENSMUST00000188360 142 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.02□□□□□ -0.33
Col5a1O88207 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.02□□□□□ -0.33
Col5a1O88207 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col5a1O88207 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.01□□□□□ -0.33
Col5a1O88207 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col5a1O88207 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Col5a1O88207 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col5a1O88207 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.01□□□□□ -0.33
Col5a1O88207 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.01□□□□□ -0.33
Col5a1O88207 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.01□□□□□ -0.33
Col5a1O88207 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.01□□□□□ -0.33
Col5a1O88207 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.01□□□□□ -0.33
Col5a1O88207 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col5a1O88207 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col5a1O88207 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.01□□□□□ -0.33
Col5a1O88207 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col5a1O88207 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a1O88207 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col5a1O88207 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col5a1O88207 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Col5a1O88207 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13□□□□□ -0.33
Col5a1O88207 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms