Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm5264-201ENSMUST00000190584 848 ntBASIC14.34□□□□□ -0.11
Cbx4O55187 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.34□□□□□ -0.11
Cbx4O55187 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.34□□□□□ -0.11
Cbx4O55187 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cbx4O55187 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cbx4O55187 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx4O55187 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cbx4O55187 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx4O55187 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.33□□□□□ -0.12
Cbx4O55187 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cbx4O55187 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cbx4O55187 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.33□□□□□ -0.12
Cbx4O55187 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Gm9385-201ENSMUST00000117563 472 ntBASIC14.33□□□□□ -0.12
Cbx4O55187 Gm15467-201ENSMUST00000120582 445 ntBASIC14.33□□□□□ -0.12
Cbx4O55187 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.33□□□□□ -0.12
Cbx4O55187 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.33□□□□□ -0.12
Cbx4O55187 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.33□□□□□ -0.12
Cbx4O55187 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cbx4O55187 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cbx4O55187 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cbx4O55187 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx4O55187 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.32□□□□□ -0.12
Cbx4O55187 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Gm44492-201ENSMUST00000197012 141 ntBASIC14.32□□□□□ -0.12
Cbx4O55187 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.32□□□□□ -0.12
Cbx4O55187 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.32□□□□□ -0.12
Cbx4O55187 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cbx4O55187 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cbx4O55187 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx4O55187 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.32□□□□□ -0.12
Cbx4O55187 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.32□□□□□ -0.12
Cbx4O55187 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.31□□□□□ -0.12
Cbx4O55187 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cbx4O55187 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cbx4O55187 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cbx4O55187 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cbx4O55187 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cbx4O55187 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.31□□□□□ -0.12
Cbx4O55187 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.31□□□□□ -0.12
Cbx4O55187 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cbx4O55187 Gm23547-201ENSMUST00000158210 271 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms