Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Efnb3O35393 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Efnb3O35393 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Efnb3O35393 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.58□□□□□ -0.56
Efnb3O35393 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.58□□□□□ -0.56
Efnb3O35393 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.58□□□□□ -0.56
Efnb3O35393 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Efnb3O35393 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.58□□□□□ -0.56
Efnb3O35393 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Efnb3O35393 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Efnb3O35393 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.58□□□□□ -0.56
Efnb3O35393 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.58□□□□□ -0.56
Efnb3O35393 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Efnb3O35393 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.57□□□□□ -0.56
Efnb3O35393 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.57□□□□□ -0.56
Efnb3O35393 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Efnb3O35393 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Efnb3O35393 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.57□□□□□ -0.56
Efnb3O35393 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.57□□□□□ -0.56
Efnb3O35393 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Efnb3O35393 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.57□□□□□ -0.56
Efnb3O35393 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Efnb3O35393 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Efnb3O35393 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.56□□□□□ -0.56
Efnb3O35393 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Efnb3O35393 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Efnb3O35393 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.56□□□□□ -0.56
Efnb3O35393 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Efnb3O35393 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms