Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna9G3X8Z7 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.71■□□□□ 0.11
Chrna9G3X8Z7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna9G3X8Z7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chrna9G3X8Z7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chrna9G3X8Z7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.71■□□□□ 0.1
Chrna9G3X8Z7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Gm27741-201ENSMUST00000185060 237 ntBASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Gm44492-201ENSMUST00000197012 141 ntBASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Gm9182-201ENSMUST00000217829 639 ntBASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chrna9G3X8Z7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.69■□□□□ 0.1
Chrna9G3X8Z7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna9G3X8Z7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chrna9G3X8Z7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna9G3X8Z7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna9G3X8Z7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna9G3X8Z7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna9G3X8Z7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms