Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Gm5187-201ENSMUST00000117317 991 ntBASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Gm29649-201ENSMUST00000185649 419 ntBASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Hfm1D3Z4R1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Gm24644-201ENSMUST00000157114 139 ntBASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Prob1-201ENSMUST00000097619 3021 ntBASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hfm1D3Z4R1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm18027-201ENSMUST00000218947 619 ntBASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm8598-201ENSMUST00000221184 836 ntBASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Dctn4-202ENSMUST00000223590 1530 ntBASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hfm1D3Z4R1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm5940-201ENSMUST00000117582 1068 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm13385-201ENSMUST00000121089 220 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm7399-201ENSMUST00000032395 858 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms