Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Mindy4b-psA0A1W2P7H6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm13616-201ENSMUST00000120600 222 ntBASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm25948-201ENSMUST00000175334 112 ntBASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm37230-201ENSMUST00000194491 818 ntBASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm5779-201ENSMUST00000218467 910 ntBASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Carlr-201ENSMUST00000181515 2574 ntBASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms