Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm6576-201ENSMUST00000169678 883 ntBASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm27000-201ENSMUST00000182943 842 ntBASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm10129-202ENSMUST00000193100 1316 ntBASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Gm3880A0A1B0GSB3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm20633-201ENSMUST00000176742 2831 ntBASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm11643-201ENSMUST00000119578 864 ntBASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm9207-201ENSMUST00000198773 1115 ntBASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Dopey2-207ENSMUST00000227156 7340 ntBASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC7.16□□□□□ -1.26
Gm3880A0A1B0GSB3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
Gm3880A0A1B0GSB3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms