Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm33142-201ENSMUST00000193913 867 ntBASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm6296-201ENSMUST00000222599 943 ntBASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rubie-203ENSMUST00000227803 2430 ntBASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms