Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm10154-201ENSMUST00000084445 354 ntBASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms