Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm12008-201ENSMUST00000117791 755 ntBASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm7284-201ENSMUST00000131667 944 ntBASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm12644-201ENSMUST00000119935 606 ntBASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rubie-203ENSMUST00000227803 2430 ntBASIC10.09□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms