Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm6296-201ENSMUST00000222599 943 ntBASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Matn2-206ENSMUST00000228570 2798 ntBASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-5A0A075B6B9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-5A0A075B6B9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms