Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gm10499-201ENSMUST00000174094 934 ntBASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16nA0A075B634 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.63
Trav16nA0A075B634 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav16nA0A075B634 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav16nA0A075B634 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Gm7506-201ENSMUST00000207758 815 ntBASIC11.08□□□□□ -0.64
Trav16nA0A075B634 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16nA0A075B634 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms