Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm8344-201ENSMUST00000119813 856 ntBASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm29257-201ENSMUST00000186115 639 ntBASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav7n-4A0A075B620 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gm21559-201ENSMUST00000220638 855 ntBASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gm8587-201ENSMUST00000076538 843 ntBASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav7n-4A0A075B620 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms