Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm12008-201ENSMUST00000117791 755 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 AV026068-213ENSMUST00000223675 1171 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9-1A0A075B601 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Gm13884-201ENSMUST00000118103 829 ntBASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9-1A0A075B601 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms