Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClcnkaQ9WUB7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClcnkaQ9WUB7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClcnkaQ9WUB7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Thap2-203ENSMUST00000218989 527 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms