Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm7029-201ENSMUST00000173226 450 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm37008-201ENSMUST00000195712 319 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Mir877-201ENSMUST00000104738 85 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm6023-201ENSMUST00000118217 606 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col4a4Q9QZR9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm2991-201ENSMUST00000173338 480 ntBASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Rps4l-202ENSMUST00000204242 789 ntBASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm18935-201ENSMUST00000212692 664 ntBASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a4Q9QZR9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm45865-201ENSMUST00000211815 945 ntBASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms