Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gm43474-201ENSMUST00000196415 774 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Upk3aQ9JKX8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk3aQ9JKX8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Upk3aQ9JKX8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Upk3aQ9JKX8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.08□□□□□ -0.15
Upk3aQ9JKX8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.08□□□□□ -0.16
Upk3aQ9JKX8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm13015-201ENSMUST00000118674 204 ntBASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm10275-202ENSMUST00000168697 495 ntBASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms