Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm18115-201ENSMUST00000221209 621 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smco4Q9JIS3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco4Q9JIS3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco4Q9JIS3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms