Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.35□□□□□ -0.11
Rnft1Q9DCN7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Gm25990-201ENSMUST00000102440 86 ntBASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Gm7222-201ENSMUST00000117512 906 ntBASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnft1Q9DCN7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnft1Q9DCN7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnft1Q9DCN7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms