Protein–RNA interactions for Protein: Q9DAW6

Prpf4, U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4Q9DAW6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Prpf4Q9DAW6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf4Q9DAW6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf4Q9DAW6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf4Q9DAW6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Gm27704-201ENSMUST00000185094 107 ntBASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf4Q9DAW6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Gm12644-201ENSMUST00000119935 606 ntBASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Gm37153-201ENSMUST00000193637 231 ntBASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf4Q9DAW6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm4535-201ENSMUST00000182274 558 ntBASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm10355-201ENSMUST00000097146 517 ntBASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.24■□□□□ 0.03
Prpf4Q9DAW6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms