Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.27■□□□□ 0.68
U2af1Q9D883 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
U2af1Q9D883 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
U2af1Q9D883 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
U2af1Q9D883 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
U2af1Q9D883 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
U2af1Q9D883 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.26■□□□□ 0.67
U2af1Q9D883 Gm27430-201ENSMUST00000184585 107 ntBASIC19.26■□□□□ 0.67
U2af1Q9D883 Gm44333-201ENSMUST00000197168 107 ntBASIC19.26■□□□□ 0.67
U2af1Q9D883 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
U2af1Q9D883 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
U2af1Q9D883 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
U2af1Q9D883 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Gm18766-201ENSMUST00000189811 808 ntBASIC19.25■□□□□ 0.67
U2af1Q9D883 Gm44872-201ENSMUST00000207864 420 ntBASIC19.25■□□□□ 0.67
U2af1Q9D883 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.25■□□□□ 0.67
U2af1Q9D883 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
U2af1Q9D883 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
U2af1Q9D883 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm15693-201ENSMUST00000120470 637 ntBASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 AA543401-201ENSMUST00000164248 1269 ntBASIC19.24■□□□□ 0.67
U2af1Q9D883 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm9182-201ENSMUST00000217829 639 ntBASIC19.24■□□□□ 0.67
U2af1Q9D883 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms