Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Olfr286-202ENSMUST00000205305 969 ntBASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Gm16476-201ENSMUST00000221544 139 ntBASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm6222-201ENSMUST00000120787 396 ntBASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm9726-201ENSMUST00000180321 678 ntBASIC17.43■□□□□ 0.38
Stag1Q9D3E6 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gm9182-201ENSMUST00000217829 639 ntBASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag1Q9D3E6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Gm7488-201ENSMUST00000117148 684 ntBASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Gm37230-201ENSMUST00000194491 818 ntBASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Gm44855-201ENSMUST00000205725 362 ntBASIC17.42■□□□□ 0.38
Stag1Q9D3E6 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Stag1Q9D3E6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Syt7-205ENSMUST00000224135 1557 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Gm46209-201ENSMUST00000217912 553 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Dupd1-202ENSMUST00000224735 548 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Stag1Q9D3E6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Stag1Q9D3E6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms