Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shmt2Q9CZN7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shmt2Q9CZN7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shmt2Q9CZN7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 AW822252-206ENSMUST00000208904 237 ntBASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shmt2Q9CZN7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.01□□□□□ -0.17
Shmt2Q9CZN7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms