Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Gm8097-201ENSMUST00000117903 829 ntBASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.57■□□□□ 0.24
Chd1lQ9CXF7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd1lQ9CXF7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Gm27646-201ENSMUST00000183989 110 ntBASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd1lQ9CXF7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms