Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Carlr-201ENSMUST00000181515 2574 ntBASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Gm18206-201ENSMUST00000207027 926 ntBASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Khdc3Q9CWU5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Gm9727-201ENSMUST00000161387 555 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Gm5177-201ENSMUST00000183092 997 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Gm2272-201ENSMUST00000194903 582 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Gm44771-201ENSMUST00000206975 626 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Gm10154-201ENSMUST00000084445 354 ntBASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc3Q9CWU5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Khdc3Q9CWU5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms