Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Otud1Q9CUB6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Otud1Q9CUB6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm29541-201ENSMUST00000191351 678 ntBASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm38294-201ENSMUST00000192831 381 ntBASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Otud1Q9CUB6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Otud1Q9CUB6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms