Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska1Q9CPV1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm11780-201ENSMUST00000136880 516 ntBASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Birc2-201ENSMUST00000054878 378 ntBASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ska1Q9CPV1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ska1Q9CPV1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.84□□□□□ -0.19
Ska1Q9CPV1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms