Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Gm14140-201ENSMUST00000119999 995 ntBASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim11Q99PQ2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim11Q99PQ2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim11Q99PQ2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Thap2-203ENSMUST00000218989 527 ntBASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim11Q99PQ2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm16198-201ENSMUST00000118766 670 ntBASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm16026-204ENSMUST00000162652 683 ntBASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm5177-201ENSMUST00000183092 997 ntBASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm27741-201ENSMUST00000185060 237 ntBASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim11Q99PQ2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms