Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm5566-201ENSMUST00000116118 459 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm3436-201ENSMUST00000179930 840 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm27341-201ENSMUST00000183570 106 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm27501-201ENSMUST00000183599 107 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm43822-201ENSMUST00000200285 476 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col25a1Q99MQ5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 App-207ENSMUST00000227737 2827 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Mir1894-201ENSMUST00000122802 81 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Gm16026-204ENSMUST00000162652 683 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Gm6013-201ENSMUST00000212264 699 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Gm17794-201ENSMUST00000220252 955 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Nsd1-205ENSMUST00000224693 852 ntBASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col25a1Q99MQ5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms