Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.99■□□□□ 0.47
RtcbQ99LF4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.99■□□□□ 0.47
RtcbQ99LF4 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.99■□□□□ 0.47
RtcbQ99LF4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RtcbQ99LF4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RtcbQ99LF4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Gm18307-201ENSMUST00000206864 949 ntBASIC17.98■□□□□ 0.47
RtcbQ99LF4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RtcbQ99LF4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Gm10275-202ENSMUST00000168697 495 ntBASIC17.97■□□□□ 0.47
RtcbQ99LF4 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.97■□□□□ 0.47
RtcbQ99LF4 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.97■□□□□ 0.47
RtcbQ99LF4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Gm10275-201ENSMUST00000092620 635 ntBASIC17.97■□□□□ 0.47
RtcbQ99LF4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RtcbQ99LF4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RtcbQ99LF4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm12957-201ENSMUST00000117835 377 ntBASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm12390-201ENSMUST00000117897 397 ntBASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm6244-201ENSMUST00000178732 841 ntBASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RtcbQ99LF4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.96■□□□□ 0.46
RtcbQ99LF4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RtcbQ99LF4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms