Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Mir6392-201ENSMUST00000184924 108 ntBASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b3Q921M3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm11478-201ENSMUST00000117851 599 ntBASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm15957-201ENSMUST00000118893 974 ntBASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm19220-201ENSMUST00000222682 803 ntBASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sf3b3Q921M3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3b3Q921M3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3b3Q921M3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.52■□□□□ 0.39
Sf3b3Q921M3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sf3b3Q921M3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sf3b3Q921M3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sf3b3Q921M3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sf3b3Q921M3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms