Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhga3Q91XY5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga3Q91XY5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Gm43767-201ENSMUST00000198933 381 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga3Q91XY5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms