Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Mir8102-201ENSMUST00000184148 139 ntBASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc5Q91XW9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm8410-201ENSMUST00000117225 605 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm2810-201ENSMUST00000118681 990 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm15483-201ENSMUST00000120338 456 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc5Q91XW9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gm13453-201ENSMUST00000118708 357 ntBASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gm29541-201ENSMUST00000191351 678 ntBASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc5Q91XW9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhgc5Q91XW9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc5Q91XW9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms