Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh18Q8VHR0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh18Q8VHR0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms