Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lmcd1Q8VEE1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gm27731-201ENSMUST00000185192 107 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gm33320-201ENSMUST00000192232 530 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gm5279-201ENSMUST00000199575 745 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lmcd1Q8VEE1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Gm11814-201ENSMUST00000119515 929 ntBASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lmcd1Q8VEE1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lmcd1Q8VEE1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms