Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd2Q8VE28 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nkd2Q8VE28 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Nkd2Q8VE28 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Gm13597-201ENSMUST00000121239 375 ntBASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkd2Q8VE28 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Gm5177-201ENSMUST00000183092 997 ntBASIC13.38□□□□□ -0.27
Nkd2Q8VE28 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Gm5312-201ENSMUST00000203728 547 ntBASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkd2Q8VE28 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkd2Q8VE28 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 121.9 ms