Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Gm14140-201ENSMUST00000119999 995 ntBASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssx2ipQ8VC66 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm4995-201ENSMUST00000117247 432 ntBASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm14494-201ENSMUST00000118786 435 ntBASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm27702-201ENSMUST00000184512 56 ntBASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ssx2ipQ8VC66 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssx2ipQ8VC66 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Gm18246-201ENSMUST00000221023 728 ntBASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ssx2ipQ8VC66 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssx2ipQ8VC66 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms