Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Gm15483-201ENSMUST00000120338 456 ntBASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Gm10175-201ENSMUST00000086013 645 ntBASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Top1mtQ8R4U6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Gm17271-201ENSMUST00000165535 355 ntBASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Gm20553-201ENSMUST00000204205 844 ntBASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Top1mtQ8R4U6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top1mtQ8R4U6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top1mtQ8R4U6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top1mtQ8R4U6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Top1mtQ8R4U6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Gm5264-201ENSMUST00000190584 848 ntBASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Top1mtQ8R4U6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top1mtQ8R4U6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Top1mtQ8R4U6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top1mtQ8R4U6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top1mtQ8R4U6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Top1mtQ8R4U6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms