Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm12008-201ENSMUST00000117791 755 ntBASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm23547-201ENSMUST00000158210 271 ntBASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm25745-201ENSMUST00000174945 133 ntBASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Mir6982-201ENSMUST00000184354 68 ntBASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc58Q8R3Q6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gm4459-201ENSMUST00000118750 468 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Gm8655-201ENSMUST00000221159 852 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc58Q8R3Q6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gm10231-201ENSMUST00000181584 441 ntBASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gm10175-202ENSMUST00000208752 441 ntBASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc58Q8R3Q6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc58Q8R3Q6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ccdc58Q8R3Q6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc58Q8R3Q6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc58Q8R3Q6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms