Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Zcchc9Q8R1J3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zcchc9Q8R1J3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zcchc9Q8R1J3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Zcchc9Q8R1J3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms