Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm22175-201ENSMUST00000175007 78 ntBASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Gm18766-201ENSMUST00000189811 808 ntBASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp40Q8R1F9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Gm6415-201ENSMUST00000118488 348 ntBASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Gm15693-201ENSMUST00000120470 637 ntBASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Mir6956-201ENSMUST00000183598 62 ntBASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp40Q8R1F9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms