Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gm7287-201ENSMUST00000205267 602 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Olfr286-202ENSMUST00000205305 969 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Dancr-204ENSMUST00000132389 2347 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm18056-201ENSMUST00000207670 568 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm18061-201ENSMUST00000208350 562 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm18063-201ENSMUST00000208529 568 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm18052-201ENSMUST00000208750 559 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 CT485787.1-201ENSMUST00000225617 968 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 AC126253.1-201ENSMUST00000227974 824 ntBASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx54Q8K4L0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Dctn4-202ENSMUST00000223590 1530 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm23931-201ENSMUST00000103842 109 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm15429-201ENSMUST00000151268 798 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm5370-201ENSMUST00000187187 574 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Gm21470-201ENSMUST00000187680 696 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx54Q8K4L0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx54Q8K4L0 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm12928-201ENSMUST00000117115 573 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm14723-201ENSMUST00000118686 215 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Gm40466-201ENSMUST00000212174 422 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 CU024892.2-201ENSMUST00000224608 832 ntBASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx54Q8K4L0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms