Protein–RNA interactions for Protein: Q8K301

Ddx52, Probable ATP-dependent RNA helicase DDX52, mousemouse

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx52Q8K301 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.23□□□□□ -0.13
Ddx52Q8K301 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx52Q8K301 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.22□□□□□ -0.13
Ddx52Q8K301 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm11594-201ENSMUST00000122313 162 ntBASIC14.22□□□□□ -0.13
Ddx52Q8K301 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm2272-201ENSMUST00000194903 582 ntBASIC14.22□□□□□ -0.13
Ddx52Q8K301 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.22□□□□□ -0.13
Ddx52Q8K301 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.22□□□□□ -0.13
Ddx52Q8K301 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx52Q8K301 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ddx52Q8K301 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.21□□□□□ -0.13
Ddx52Q8K301 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx52Q8K301 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx52Q8K301 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx52Q8K301 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.21□□□□□ -0.14
Ddx52Q8K301 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx52Q8K301 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ddx52Q8K301 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Efs-202ENSMUST00000227037 2540 ntBASIC14.2□□□□□ -0.14
Ddx52Q8K301 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx52Q8K301 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.2□□□□□ -0.14
Ddx52Q8K301 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx52Q8K301 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.2□□□□□ -0.14
Ddx52Q8K301 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx52Q8K301 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms