Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Gm7862-201ENSMUST00000121461 292 ntBASIC16.03■□□□□ 0.16
Sox30Q8CGW4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Gm15173-201ENSMUST00000122049 433 ntBASIC16.02■□□□□ 0.16
Sox30Q8CGW4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox30Q8CGW4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.02■□□□□ 0.15
Sox30Q8CGW4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Gm7153-201ENSMUST00000117092 455 ntBASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Gm45747-201ENSMUST00000212203 999 ntBASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Gm9182-201ENSMUST00000217829 639 ntBASIC16.01■□□□□ 0.15
Sox30Q8CGW4 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox30Q8CGW4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Gm27300-201ENSMUST00000184085 97 ntBASIC16■□□□□ 0.15
Sox30Q8CGW4 Gm27335-201ENSMUST00000184758 97 ntBASIC16■□□□□ 0.15
Sox30Q8CGW4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Sox30Q8CGW4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox30Q8CGW4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox30Q8CGW4 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms