Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp44Q8C2S0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp44Q8C2S0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp44Q8C2S0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp44Q8C2S0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Gm13015-201ENSMUST00000118674 204 ntBASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Gm43474-201ENSMUST00000196415 774 ntBASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Gm43575-201ENSMUST00000196420 516 ntBASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.13■□□□□ 0.33
Usp44Q8C2S0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp44Q8C2S0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Gm25287-201ENSMUST00000103846 110 ntBASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Gm22918-201ENSMUST00000103855 110 ntBASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Gm43125-201ENSMUST00000201724 730 ntBASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.12■□□□□ 0.33
Usp44Q8C2S0 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms