Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tsen54Q8C2A2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Matn2-206ENSMUST00000228570 2798 ntBASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tsen54Q8C2A2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tsen54Q8C2A2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms