Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Mir3113-201ENSMUST00000175478 76 ntBASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Gm37935-201ENSMUST00000192012 982 ntBASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4Q8BQZ5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4Q8BQZ5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms