Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chrnb3Q8BMN3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Chrnb3Q8BMN3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Chrnb3Q8BMN3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Mir6956-201ENSMUST00000183598 62 ntBASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chrnb3Q8BMN3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chrnb3Q8BMN3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chrnb3Q8BMN3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms